Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911666.1_cds_XP_016461695.1_54990
CDS Infomation

[gene=LOC107784996] [db_xref=GeneID:107784996] [protein=inactive poly [ADP-ribose] polymerase RCD1-like isoform X2] [protein_id=XP_016461695.1] [location=join(17872..19001,19938..20179,21039..21130,22060..22221,22360..22455,25710..25775)] [gbkey=CDS]
Sequence

ATGGAAACAAAATACGGAAAGGTATTGGATAGGAGCCAAAACATTGTTGTTGACTTGAAG
AGAAAACGGGCAGCTCGATGCGAGACCCATCTCTCTGGGGCTACTCACATGATATTTCCT
GTCCGAACCTCGCTGAACTCATCCATCCGCCCTCTTGGAAAACGGAGGAAGCTGAATGGA
TCAAACAGCACGTGTGGTGGTTGTGCGTTTCACCTAAGAAAATCTCTGCTTAGATATTAT
CTCAATTTCAGGAAAAGTGGGCTTCCACAACGTTTGATGTACTATCAGAAGGGTCAGTGG
ACTGATTTCCCTGAGAACATTGTTACAATGGCTAAGAAAGATCTCCGAATAAAGAAATCA
GTGACAGAGGTGGAGTTCAATGGTAAAATTTTTGTGCTTGATTTCTTCCATATGATGCGA
TTGGACCTGAAGTCAGGTCTGCAGCAACCTATTGCATGGATTGATGAAGCAGGCAACTGC
TTTTTCCCGGAATTATTTGCTAATTGTGATGAACTGCATGAGTGTTGTCACAGCGAACAC
AAGGACTCCATAGAGGTGGATTCTGAGACAGAGGGTTCCAATGATCTGGAGATGCAGCTG
GAGATTGAAATTAATGGAGCGGACATGTCAAGTTTGAAGGAATCTAGTGGAGAGTCCAAT
GCTATTGTTAAGCAAGTTAACTTATGTCACAAACCTGCAGCAAAAAATTGCACTGCAGAA
GTTGGTGATAATTGTGTCAGACTCTCAGATACGAAATCCATGGATGACTCCACGGAAAAT
CATCAAATGGTGGAAAATGCTGCGTGCTGCAAGTGGGAATATCTGGACCCAGATGTTGTG
GGTGAGATGTTTCTCAAGGGTATCGATTCACCTTCTGGTGCAAAGATATTTGAATTACAT
CGTGTTTCAAGTACTTTCATGGAAGTTCGAAAGGAACTCTTTCAAAAGCAGGTGGAGATT
ACGAAGAAGCAGCGTGGGGGTGCCAGTCTTAGTTATGCTTGGCTTCCTTCTTCTAAAGGA
ATGATTACGAGTATTATGAAGTATGGGCTTGCTAATTATGATCTATCGAAATCCAAGTCC
AGATATGGCGTTGGTGTTCATCTTTTCCCTGCTAACTGTACTGAGATCAGTGCAAAGTAT
TGTGATTATGACGAAAATGGTGTACAGCACATGATATTGTGCCGTGTAATAATGGGAAAC
ATGGAACTGGTTTATCCTGGATCTAAGCAGTTCCATCCCAGTAGTGAGGATTTCGATAAT
GGCGTTGATAATCTTGAAAATCCGAAGTGTTACGTGGTCTGGACTATGAATATGAACACT
CATATCTTTCCGGAATATGTTGTCAGTTTCAAGTTGTCTCCTGATGCTAAAGGATATCTT
GTTGGAAACGAGAGCCCAATTGATGTCTCTGCTGTCAGTACTTGTTGTAATCAGGTACCG
GCAGATACACTTCCTACTGACTTGGGAACTGACGGCTATCAGAATTCACTGGGGTTGGCC
TCAAAAAAGGATGCAAGGACGCCGAAGTCCCCCTGGATGCCATTCCCCATGTTGTTTGCA
GCAATTTCGAGGAAAGTGCCTCAAGAGGATATGAACCTAGTTAGTAGCAATTATGAGTTA
TTCAAGGACAAGAAGATAAGTCGGGATGAATTTGTCAGAAAGTTGAGGTTGATCGTAGGG
GATACTTTGTTAAGGTCCACAATAACGAGTCTTCAATGCAAGGTACCACCTAAATCAATG
GAATTGGTCCGCATAAAACAAGAGCAGGAGAGTGTCTGCCTGGAGTGA

Peptide Sequence

PEP ID

XP_016461695.1
PEP Infomation

PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotiana tabacum]
Sequence

METKYGKVLDRSQNIVVDLKRKRAARCETHLSGATHMIFPVRTSLNSSIRPLGKRRKLNG
SNSTCGGCAFHLRKSLLRYYLNFRKSGLPQRLMYYQKGQWTDFPENIVTMAKKDLRIKKS
VTEVEFNGKIFVLDFFHMMRLDLKSGLQQPIAWIDEAGNCFFPELFANCDELHECCHSEH
KDSIEVDSETEGSNDLEMQLEIEINGADMSSLKESSGESNAIVKQVNLCHKPAAKNCTAE
VGDNCVRLSDTKSMDDSTENHQMVENAACCKWEYLDPDVVGEMFLKGIDSPSGAKIFELH
RVSSTFMEVRKELFQKQVEITKKQRGGASLSYAWLPSSKGMITSIMKYGLANYDLSKSKS
RYGVGVHLFPANCTEISAKYCDYDENGVQHMILCRVIMGNMELVYPGSKQFHPSSEDFDN
GVDNLENPKCYVVWTMNMNTHIFPEYVVSFKLSPDAKGYLVGNESPIDVSAVSTCCNQVP
ADTLPTDLGTDGYQNSLGLASKKDARTPKSPWMPFPMLFAAISRKVPQEDMNLVSSNYEL
FKDKKISRDEFVRKLRLIVGDTLLRSTITSLQCKVPPKSMELVRIKQEQESVCLE

Transcript Sequence

Gene sequence data has not been registered.